Reading the following page ( ) did not help, unless I missed something. So I think it’s Windows 8.1 is mistaking a long calculation to PC being crashed. Besides, I successfully managed to carry out under Windows 7 Home (64bit). I feel this is non-sense, because I saw in the task manager that APBS was happily doing its calculation, just taking some time. Note: While running the above procedure for a larger protein (55 kDa) under Windows 8.1 (64 bit), the PC hung with an error message, “computer has stopped responding” or something like that.One can ray trace it but it doesn’t seem to make much difference to be honest (below). After waiting, the screen should automatically change to the “Visualisation” tab.I imagine APBS was originally developed to run of Linux-type operating systems. ![]() Again, make sure that there is not a single gap in any of the directory paths.Firstly, load the coordinates of the structure (.pdb file). Prepare the PQR file from the PDB file of the structure that you want to draw the electrostatic surface potential diagrams of.Įither input the PDB accession code, or upload a PDB file.
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